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Religion

Comparative Religion

Belief.net
Creeds of Christendom
Sacred Texts -- huge collection of sacred texts from every religion immaginable

Secularism

Infidels - secular commentary on current events, plus a huge library of articles
American Atheists - secular commentary on current events, plus a huge library of articles
Secular Humanism - eZine
Humanists - this is actually a resource center for humanist sites which includes free hosting and email.
Skeptics Annotated Bible - commentary by biblical verse and also by topic
Freethought Radio - live and recorded broadcasts
Christianity Meme - a site dedicated to the exposure that Christanity is a meme.

Writings

Early Christian Writings - excellent on-line collection of writings, with options to sort by date, name, and other criteria.
Early Jewish Writings
New Advent's Early Church Fathers - sorted by author name
CCEL's Early Church Fathers - organized by writing type
The Latin Library -- includes translations of Church Fathers in Latin

Language

Biblical Hermeneutics -- includes Hebrew, Greed, and other ancient near-eastern languages.
Ancient Scripts -- origins of various written languages

Canons

Clement of Alexandria -- The Development of the Canon of the New Testament
Cross-reference Table -- The Development of the Canon of the New Testament
Islamic-awareness.org -- Early Lists Of The Books Of The New Testament, various church canons

Textual Criticism

A Student's Guide to New Testament Textual Variants -- New Testament
Bible Research -- textual varients, Old and New Testaments
Salvation Contradictions -- Bible contradictions about salvation

Resource Pages

Resource Pages for Biblical Studies

Blogs

PaleoJudaica

Politics

US Constitution -- timelines, documents, more
Apologies Accepted -- Cheer up! (response to Sorry Everybody)
F-Scale -- see where you fall on the fascism scale

Current Events

Policy Review

History

American War of Independence 1775 - 1783

Humanism

Council for Secular Humanism
Progressive Humanism
Secular Humansim
The International Institute for Secular Humanistic Judaism
Humanistic Judaism Home Page

Human Rights

Human Rights Organizations
Universal Declaration of Human Rights -- adopted by United Nations

Church and State

Current Issues

Science

New Science

Demographics

Belief Statistics
A Survey of UFOLogists -- and their beliefs in unexplained phenomena